Media (see
below and protocols page for recipes)
Yeast are commonly grown in the laboratory
using two general types of media, rich media (YePD) and synthetic media (minimal
media). Rich media is formulated to supplies yeast with ample metabolites,
including a nitrogen source and a carbon source, usually glucose but can be
varied. Synthetic media can be formulated to be complete or selective and
is more of a 'bare bones' type media, containing known types and amounts of
carbon and nitrogen sources, essential minerals and vitamins as well as all or
some of the necessary amino acids and nitrogenous bases, depending on the
particular genetic background of the strain being used. To make media
selective, a drop out approach uses a minimal media base, and
adds all the potentially needed amino acids and nitrogenous bases except the
one(s) for which selection is desired. It is possible to have
double-drop-out media or to leave out even more components when desired.
Growth
Yeast are normally grown at 30oC
and can be grown on agar-containing plate media or in liquid media. Yeast
grown on plate media can be stored at 4oC for a month or two (wrap in
parafilm helps; restreak as necessary) as a for use in ongoing experiments.
If the plates contain rich media, the yeast should be regrown every six weeks.
If the plates contain synthetic media, the yeast should be regrown every four
weeks. Liquid cultures are can be grown in culture test tubes or
flasks and are usually accompanied by rolling or shaking to keep the yeast in
suspension and the cultures well aerated for optimal growth. Progress of
growth us usually monitored by the absorbance reading at 600 nm in a
spectrophotometer; dilute cultures in media if OD is over 0.8 to get an accurate
reading. When yeast are grown in a media containing a fermentable carbon
source (i.e. glucose), they grow exponentially over time until the fermentable
carbon source is depleated (see graph below). This point is the diauxic
shift and marks a slower but still exponential phase of growth that utilizes the
non-fermentable carbon sources (ethanol) produced by the yeast. Once yeast
stop growing, they have by definition entered stationary phase. Most
laboratory experiments are conducted using yeast grown and harvested in early
log-phase growth (OD600 =
0.5 - 1.0) although this can be altered to serve the purposes of the experiment.
http://cmgm.stanford.edu/pbrown/explore/curve.html
Getting started
Yeast are normally cultured in liquid for
laboratory experiments. An overnight culture is started in the appropriate
media by innoculating the media with a 'glob' taken by a sterile applicator
stick from a petri plate stock of the desired yeast strain. This liquid
culture is placed in a roller or shaker overnight at the appropriate
temperature. The following day, this overnight culture is used to
innoculate liquid cultures for log phase growth. The amount of liquid
overnight culture used to innoculate the log-phase culture depends on the
conditions for growing the yeast, but generally the yeast should undergo AT
LEAST two doublings or more
before collection for the experiment (i.e. they should start at OD600 0.1
if the cultures are to be collected at OD600 0.4).
It is always easier to innoculate with less than needed and add more innoculum
than it is to deal with having innoculated the log-phase culture too heavily at
the on-set. Consider taking the OD600 reading
after the first attempt to verify any 'guesses' you have about how much to use,
expecially when setting up multiple similar cultures. The log-phase
cultures are then placed in a roller or a shaker at the appropriate temperature.
The state of their growth can be monitored using OD600 readings
until the desired reading is obtained. The yeast are then collected by
centrifigation for the purposes of the experiment.
Culture tips
Healthy laboratory yeast strains have a dividing
time of about 90 minutes in rich media and 140 minutes in synthetic media (both
with glucose) when grown at 30oC. The rate of growth will be
different if less easily metabolized carbon sources are used.
The rate of the culture will be enhanced with
good aeration, so shaking vigorously can be of great help. The best
aeration (using normal microbial culture equipment) comes from using an orbital
shaker, where yeast are often shaken at 150-200 rpm, or even 250-300 rpm for
very good aeration. Another way to enhance aeration is to make sure the
surface area of the interface of the media and the air is maximal. Flasks
optimize this when they are used with media in volumes of only 10-20% of their
total capacity. Full culture tubes of course have the least aeration.
Ingredient |
Amount |
Bacto-yeast extract |
10g |
Bacto-peptone |
20g |
Glucose |
20g |
Bacto-agar |
20g |
Distilled water |
1000ml |
*add 80 mg of adenine sulfate if you're growing ade2 strains
YPGE
Ingredient |
Amount |
Bacto-yeast extract |
10g |
Bacto-peptone |
20g |
Glycerol |
30ml |
Ethanol (add after autoclaving) |
30ml |
Bacto-agar |
20g |
Distilled water |
970ml |
*ethanol is a non-fermentable carbon source, so YPGE can be used to test for mitochondrial defects
Synthetic minimal Dextrose (SD)
Ingredient |
Amount |
Bacto-yeast nitrogen base without amino acids |
6.7g |
Optional: Complete mix (see below) | 2g |
Glucose |
20g |
Bacto-agar |
20g |
Distilled water |
1000ml |
Complete Mix for Use in SDC
Ingredient |
Final Concentration in Medium (mg/L) |
Amount Used for Making Dry Stock |
Adenine Sulfate |
20 |
200mg |
Uracil | 20 | 200mg |
L-Tryptophan |
20 |
200mg |
L-Histidine-HCl |
20 |
200mg |
L-Arginine HCl |
20 |
200mg |
L-Methionine | 20 | 200mg |
L-Tyrosine | 30 | 300mg |
L-Leucine | 100 | 1g |
L-Isoleucine | 30 | 300mg |
L-Lysine HCl | 30 | 300mg |
L-Phenylalanine | 50 | 500mg |
L-Glutamic Acid | 100 | 1g |
L-Aspartic Acid | 100 | 1g |
L-Valine | 150 | 1.5g |
L-Threonine | 200 | 2g |
L-Serine | 400 | 4g |
*please note that individual ingredients may be left out to make "drop-out mix" for use in selective media (SDC-ura, for example)
Methods in Yeast Genetics: A Laboratory Course Manual
by Kaiser, Michaelis, and Mitchell
Cold Spring Harbor Laboratory Press 1994